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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7571932 chr2:132233606 C/G TUBA3E chr2:130949316-130956034:- 0.53 6.19 1.33E-9 Box Plot
THCA rs7571947 chr2:132233654 C/T TUBA3E chr2:130949316-130956034:- 0.53 6.19 1.33E-9 Box Plot
THCA rs7572974 chr2:101092532 T/A LOC285359 chr3:101431278-101432259:+ 0.31 6.24 9.89E-10 Box Plot
THCA rs7573493 chr2:113269901 G/A RGPD5 chr2:110550335-110615272:+ -0.48 -6.72 5.03E-11 Box Plot
THCA rs7574974 chr2:101090713 G/A LOC285359 chr3:101431278-101432259:+ 0.3 6.06 2.74E-9 Box Plot
THCA rs7575099 chr2:46879599 C/G THAP11 chr16:67875985-67878098:+ -0.61 -6.77 3.72E-11 Box Plot
THCA rs7576144 chr2:101129240 A/G LOC285359 chr3:101431278-101432259:+ 0.3 6.05 2.9E-9 Box Plot
THCA rs75763514 chr6:151733213 C/T NEK5 chr13:52607747-52703214:- 0.61 7.08 5.01E-12 Box Plot
THCA rs7577128 chr2:132259950 C/T CCDC74B chr2:130896860-130902707:- 0.4 7.21 2.17E-12 Box Plot
THCA rs7577883 chr2:101073996 T/G LOC285359 chr3:101431278-101432259:+ 0.47 11.23 3.83E-26 Box Plot
THCA rs75782365 chr6:26408551 T/G ZFP57 chr6:29640169-29648887:- 0.77 6.67 7.11E-11 Box Plot
THCA rs7578352 chr2:101074436 T/C LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs7578708 chr2:101200111 A/G LOC285359 chr3:101431278-101432259:+ 0.27 6.04 3.1E-9 Box Plot
THCA rs7579445 chr2:101069396 T/C LOC285359 chr3:101431278-101432259:+ 0.47 11.23 3.83E-26 Box Plot
THCA rs7579864 chr2:132260032 C/T CCDC74B chr2:130896860-130902707:- 0.41 7.26 1.54E-12 Box Plot